Class Specialization
BndmAlgo
Backward Nondeterministic Dawg Matching algorithm. Exact string matching using bit parallelism.
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BndmAlgo | |||||||
Include Headers
seqan/find.h
Parameters
The needle type. Types: String |
Remarks
The types of the needle and the haystack have to match.
Specialization of
Metafunctions
| Type of the object a given object depends on. (Pattern) | |
| Returns the needle type of a Pattern type. (Pattern) | |
| Returns the scoring scheme of an approximate searching algorithm. (Pattern) |
Functions
| Search for a Pattern in a Finder object. (Pattern) | |
| Search the begin of an approximate match. (Pattern) | |
| The object a given object depends on. (Pattern) | |
| Returns the needle of a Pattern object (not implemented for some online-algorithms). (Pattern) | |
| Position of an iterator. (Pattern) | |
| The scoring scheme used for finding or aligning. (Pattern) | |
| Sets the needle of a Pattern object and optionally induces preprocessing. (Pattern) | |
| Sets the scoring scheme used for finding or aligning. (Pattern) |
SeqAn - Sequence Analysis Library - www.seqan.de
